Training & Visitors
Training workshops & visiting scientists
The CBA has brought over 60 interstate and international scientists to Canberra for training and collaboration opportunities, and many more for our conferences and symposia, and Synthesis Groups.
"CBA’s workshops provide excellent opportunities to learn from and network and interact with presenters that may not otherwise come to Canberra." CSIRO Research Scientist
“The activities offered by the CBA have been very important during my PhD project, especially the workshops.” ANU PhD Student
"The CBA's opportunities — including attending and leading workshops — have equipped me with a skill set that is sought-after as an ECR. I strongly urge PhD students and ECRs to take full advantage of them, as they are instrumental in cultivating the skill sets required for success”. University of Canberra Post Doc
We encourage input from Early Career Researchers (Postdocs and PhD students) regarding the types of training activities they need to address their specific research requirements and interests via our Training support funding:
- Computational macroevolution and phylogenetic comparative methods presented by Dan Rabosky, Univ. Michigan
- Population genomics for biodiversity, biosecurity and rapid adaptation presented by Henry North, University of Cambridge
- Curating transposable element libraries for non-model organisms and assembling through the hard stuff presented by Jessica Storer & Rachel O’Neill, Univ. Connecticut
- Unmethylated region (UMR)-sequencing for identifying cis-regulatory regions across populations harboring complex genomes presented by Peter Crisp & Kimmy Zhang, Univ. Queensland
- Complete and accurate annotation of troublesome gene regions presented by Ivan Koludarov, Technical Univ. Munich
- Conservation and the genomics of populations presented by Fred Allendorf, Univ. Montana
- Right-way science approach to understanding impacts of climate change on plants presented by Boyd Wright, UNE; Martin Nipper, Mutitjulu Community Aboriginal Corporation
- Gen3sis: Simulating the evolution of biodiversity presented by Oskar Hagen, German Centre for Integrative Biodiversity Research
- R-evolutionary Insights: Deep dive into SNP-based population genomics
- Stochastic modelling meets evolutionary biology presented by Barbara Holland, Małgorzata O'Reilly, Qin Liu, Univ. Tasmania
- Estimating biogeographic history with BioGeoBEARS and PhyBEARS presented by Nicholas Matzke, Univ. Auckland
- Nanopore sequencing for biosecurity
- A beginner’s guide to population genomics simulations with SLiM and slimr presented by Russell Dinnage, Florida International Univ.
- Putting pen to paper: Scientific writing for researchers presented by Sarah Whiteley, Univ. Canberra
- Mechanistic niche modelling using NichemapR presented by Mike Kearny Univ. Melbourne
- SNPs in population- and phylo-genomics presented by Adam Leaché, Washington, Remco Bouckaert, Auckland, Luciano Beheregaray, Chris Brauer Flinders, Sam Banks, CDU
- Nanopore Sequencing Workshop
- Biodiversity in R: models and methods for spatial analysis
- Hierarchical occupancy-detection modelling presented by Gurutzeta Guillera-Arroita & José Lahoz-Monfort, Univ. Melbourne
- Demographic inference for comparative phylogeograpy using Next-Gen sequence data presented by Alexander Xue, City Univ New York
- Computational macroevolution and phylogenetic comparative methods presented by Dan Rabosky, Univ. Michigan
- Population and landscape genomics presented by Matteo Fumagalli, Univ. College London, Anders Goncalves da Silva, Monash Univ., Rose Andrew, UNE, Justin Borevitz, ANU, Kevin Leempoel, Swiss Federal Institute of Technology
- R Bootcamp
Our Visiting Scientist funding enhances collaboration opportunities by supporting external researchers' visits to our partner institutions. In addition to research seminars and meetings, our visiting scientists also often provide training opportunities during their visit to Canberra:
- Dan Rabosky, Univ. Michigan EMCR Theo Murphy Flagship workshop: One Million Years of Sand: Climate Cycles and Biotic Evolution in Arid Australia
- Jack Hollister, Natural History Museum Seminar: Robotic Digitisation and Machine Learning for High-Throughput Phenotyping of Natural History Collections; Workshop: High-Throughput Phenotyping and Strategic Digitisation: Trait Extraction, Interoperability, and Information-Theoretic Prioritisation
- Paula Raile Riccardi, Bavarian State Collection of Zoology Workshop: Large Scale Integrative Taxonomy
- Carlos Melian, Swiss Federal Institute of Aquatic Science and Technology (EAWAG) Workshop: Multilayers networks in Ecology and Evolution
- Nic Rawlence, Univ. Otago Workshop: Historical gene expression and epigenetic analysis of ancient and museum specimens
- Ivan Koludarov, Univ. Munich Workshop: Complete and accurate annotation of troublesome gene regions
- Paul Frandsen, Brigham Young Univ. Seminar: Threading links between the silk genotype and phenotype in caddisflies, nature’s underwater architects and Workshop: Sequencing, assembling, and annotating genomes with PacBio HiFi data
- Adam Leaché Univ. Washington Seminar: Comparative species delimitation: examples with lizards and Workshop: Multi-species Coalescent Analysis
- Oskar Hagen, German Centre for Integrative Biodiversity Research, iDiv Seminar: From German Romanticism to Modern Computational Biodiversity Models and Workshop: Gen3sis: Simulating the evolution of biodiversity
- Bruce Walsh Univ. Arizona Seminar: Leveraging museum specimens to ask ecological questions in the era of genomics and Workshop: Detecting selection
- Emma Sherratt, Adelaide Univ. Seminar: Shape of Life: reading the evolutionary history of animals by measuring them and Workshop: Leveraging morphological and genomic data to elucidate evolutionary patterns
- Camille Roux, Université de Lille Seminar: How far can genes travel in the living world? and Workshop: ABCday: Approximate Bayesian Computation in one day (and a half)
- Rudolf Myer, Museum fur Naturkunde, Berlin Roundtable discussion: Advancing taxonomy discussion and Seminar: Accelerating biodiversity discovery in hyperdiverse arthropod clades with robots and Nanopore sequencing
- Gwendolyn Peyre Univ. Andes Seminars: Climatic refugia in the coldest neotropical hotspot, the Andean páramo and Plant invasions in the northern Andes: a socio-ecological perspective
- Mario Dos Reis, Queen Mary Univ. London Seminar: Bayesian molecular clock-dating of phylogenies: fossils, genomes and uncertainty and Workshop: Bayesian molecular clock dating using genome-scale datasets
- Tracy Heath, Iowa State Univ. Workshop Bayesian phylogenetics and macroevolution in RevBayes
- Jeff Good, Univ. Montana Seminar: The evolution of seasonal camouflage and Workshop Population genomics for non-model species
- Alan Lemmon, Florida State Univ. Seminar and Workshop: Anchored Phylogenomics
- Sasa Stefanovic, Univ. Toronto Seminar: Difficult questions on reticulate evolution in Cuscuta (dodders; Convolvulaceae)
- Vicki Funk, Smithsonian Seminar: Evolution of the Composiate in Oceania
- Scott Edwards, Harvard Univ. Workshop: Phylogenomic analyses using the multispecies coalescent model
- Olivier Loudet, INRA Versailles Workshop: Genomic and phenomic tools to identify the genetic basis underlying natural variation and adaptation
- Oliver Niehuis, Museum Koenig Bonn Workshop: DNA target enrichment in phylogenomics - molecular and bioinformatic principles
- Eddie Holmes, Univ. Sydney RSB Director's seminar: The Greatest Experiment in Evolution: Viral Biocontrol of Rabbits
- Alexei Drummond, Univ. Auckland RSB Director's seminar: Developing Darwin’s computer and Workshop: Phylogenomics using BEAST2
- Peter Smouse, Rutgers Univ. Workshop: Genetic analysis for population studies
- Steve Stones-Havas, Biomatters, NZ Workshop: Geneious
- Joseph Heled, Univ. Auckland Workshop: BEAST
Co-supervised student projects
The CBA also helps facilitate ANU and UC students spending time in CSIRO labs, providing valuable exposure to CSIRO scientists and research. Co-supervised honours projects also afford an excellent opportunity to develop collaborative linkages between CSIRO staff and university researchers. PhD students are also eligible to apply for Ignition Grants with their supervisors.
"The CBA grant I received allowed me to see my honours year as much more than a university assessment. It gave me an incredible opportunity and working with CSIRO encouraged me to think about the potential consequences and applications of my research. It also helped fund conference attendance and I feel attributed to the beginning of an exciting science career for me.” ANU Honours student“This funding was integral to my PhD project, and development as an early-career scientist, facilitating networks with CSIRO.” ANU PhD Student"I believe my project benefitted from having a cross-institutional supervisory team, and it was useful to my personal journey to see how both ANU and CSIRO work, and how they work together. I actually found the experience of applying for this grant a very useful exercise." ANU Honours Student
CBA-funded Honours/Masters student projects
- Telomere length as a biomarker for stress in an Australian pest moth
- Beating the heat? Population genomics of climate change in Australian birds
- Uncovering the hare microbiome
- Bill adaptation in parrots: finding loci involved in surface area increases by integrating morphometrics with Next Gen Sequencing
- Will polyploidy provide a reproductive advantage in a changing climate? A test case with Themeda triandra (Kangaroo grass)
- Sequencing the genome of an Australian Alpine plant
- Evolution of chemical defences in Tasmanian dalodesmid millipedes (Diplopoda: Dalodesmidae)
- Exploring Australia’s diversity for pathogens of weeds
- Using herbarium specimens to determine the drivers of mast seeding in spinifex and hence the drivers of boom-bust growth in vertebrate populations of arid Australia
- A comparative approach to understanding gene flow in avian species across Sahul
- How will alpine soil invertebrate communities respond to drier soils and changing snow dynamics due to climate change?
- Testing requirements for microbiome directed evolution: Microbiome-derived heritability and phenotypic variance in black soldier fly (Hermetia illucens) larvae