On the maintenance of adaptive genetic variation to cope with environmental change: considerations from population genomics

Species across the globe are experiencing drastic changes in environmental conditions as a result of human activities. Understanding and predicting how organisms respond to human-driven environmental change is therefore a major concern.

In this talk, I discuss several mechanisms that may enhance the maintenance of genetic variation and evolutionary potential, which have been overlooked and should be considered in future theoretical development and predictive models: the prevalence of soft sweeps, polygenic basis of adaptation, balancing selection and transient polymorphisms, parallel evolution, as well as epigenetic variation.

Research on fish population genomics has provided ample evidence for local adaptation at the genome level. However, pervasive adaptive evolution seems to almost never involve the fixation of beneficial alleles. Instead, adaptation apparently proceeds most commonly by soft sweeps entailing shifts in frequencies of alleles being shared between differentially adapted populations.

One obvious factor contributing to the maintenance of standing genetic variation in the face of new environmental selective pressures is that adaptive phenotypic traits are most often highly polygenic, and consequently the response to selection should derive mostly from allelic co-variances among causative loci rather than pronounced allele frequency changes. Balancing selection of various forms may also play an important role in maintaining adaptive genetic variation and contribute to maintaining the evolutionary potential of species to cope with environmental change.

A large body of literature on fish also shows that repeated evolution of adaptive phenotypes is a ubiquitous evolutionary phenomenon that seems to occur most often via different genetic solutions, further adding to the potential of species to cope with a changing environment. Moreover, a new paradox seems to be emerging from recent fish studies whereby populations of highly reduced effective population sizes and impoverished genetic diversity can apparently retain their adaptive potential.

Although more empirical support is needed, several recent studies suggest that epigenetic variation could account for this apparent paradox. Therefore, epigenetic variation should be fully integrated with considerations pertaining to role of soft sweeps, polygenic and balancing selection, as well as repeated adaptation involving different genetic basis towards improving models predicting the evolutionary potential of species to cope with a changing world.

Professor Louis Bernatchez - Institut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Québec - is an evolutionary biologist specialising in genomics, conservation, and evolution of fishes. He holds a Canadian Research Chair in genomics and conservation of aquatic resources. He co-founded and is currently the chief-editor of the journal Evolutionary Applications and Reviews Editor of Molecular Ecology. He is a co-founder of the Canadian Society for Ecology and Evolution. 

Louis will be at ANU for a few days - if anyone is interested in meeting him please let us know - he will be available Tues am (14/3) and Wed (15/3) before and after his seminar.

Date & time

12–1pm 15 March 2017


E&E Seminar Room, Gould Building 116, Daley Rd, ANU


Louis Bernatchez, Université Laval

Event series


 Claire Stephens

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